Academic job in UCPH University of Copenhagen, Denmark

Network biology specialist in Bioinformatics – UCPH, Denmark, 2022

Denmark

A position as network biology specialist is available at the at Novo Nordisk Foundation Center for Protein Research at the Faculty of Health and Medical Sciences, University of Copenhagen, Denmark, 2022

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General Info

Position: Network biology specialist
No. of Positions: 1
Research Field:
Deadline to Apply: Expired
Joining Date: May 15, 2022
Contract Period: Permanent
Salary: According to standard norms

Workplace:
Novo Nordisk Foundation Center for Protein Research

University of Copenhagen (UCPH), Denmark

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Qualification Details

You will have a bachelor’s degree in a subject such as bioinformatics. Experience with analysis and prediction of protein interaction network is essential, including evaluation of the reliability of protein interaction networks. The job requires experience with working on Linux servers and with programming Python or R. Since the job involves close collaboration with researchers, strong communication and interpersonal skills are required.

Preferred experience:

  • Experience with analysis and visualization of protein interaction networks, ideally using STRING and Cytoscape
  • Experience with interpretation of the results from automatic text mining
  • Knowledge of methodologies for quality assessment and quality scoring of protein interaction networks.

Responsibilities/Job Description

You will be employed in the Cellular Network Biology group with reference to Prof. Lars Juhl Jensen. The group develops state-of-the-art tools for generation and analysis of molecular interaction networks from proteomics data and text mining, which we make freely available to the scientific community.

Tasks include:

  • Developing scripts to combine and integrate interaction data from, e.g., experimental sources and automatic text mining
  • Developing a pipeline to automatically transfer both intraspecies and interspecies interactions to host–parasite protein pairs based on homology
  • Scoring and assessing the quality of the resulting host–parasite interaction networks through benchmarking against current knowledge
  • Documenting the code base to make it usable by others

How to Apply?

Application Method: Online Application
Ref. No.: -

Application Procedure

Your application should include (in English or Danish):

  • Letter of application addressing the requirements (max. one page).
  • Curriculum Vitae
  • A certified/signed copy of certificate(s) of education

Please submit your application by clicking on “Apply Now” below. Only online applications will be accepted.

About the Employer:

Note or Other details

The position is permanent and part-time (10 hours per week on average) with flexible working hours. Starting date is 15th May 2022 or as soon as possible thereafter.

Salary, pension and terms of employment will be in accordance with the agreement between the Danish Ministry of Finance and AC (the Danish Confederation of Professional Associations) as an academic employee or special consultant depending on your qualifications. Depending on qualifications, a supplement may be negotiated.

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Contact details

For further information regarding the position, please contact:

Lars Juhl Jensen, [email protected], +45 3050 6479

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